The detailed information of tRNA gene sequence


Sequence ID>WENV170684347
Genome IDLFRM01033477
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 435
End posion on genome 507
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aatctaatac
tRNA gene sequence 
GGGCGTGTAGCTCAGGTGGTAGAGCACTTGACTTTTAATCAAGTTGTCCGGGGTTCGAAT
CCCCGCACGCTCAtgg
Downstream region at tRNA end position 
aaaaagactc
Secondary structure (Cloverleaf model)
>WENV170684347	Lys	TTT
                   c      Atgg aaaaagactc
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T A
                    T     G C C C C     A
      G G A        A      | | | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TTGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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