The detailed information of tRNA gene sequence


Sequence ID>WENV170684378
Genome IDLFRM01035209
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 19132
End posion on genome 19216
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aatattaggc
tRNA gene sequence 
GCGAGGGTTGCCAAGCCAGGTCAAAGGCGCTGGATTCAGGGTCCAGTCTCGAAGGAGTTC
GAGCGTTCAAATCGCTCCCCTCGCAttc
Downstream region at tRNA end position 
ttttgacgcg
Secondary structure (Cloverleaf model)
>WENV170684378	Leu	CAG
                   c      Attc ttttgacgcg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C G C     A
    C C G A        T      | | | | |     A
  A         A C C G       G A G C G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCTCGAAGGAGTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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