The detailed information of tRNA gene sequence


Sequence ID>WENV170684409
Genome IDLFRM01037245
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2498
End posion on genome 2573
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttctttatac
tRNA gene sequence 
AGGGGTATAGCTCAGCTGGTAGAGCAGCGGTCTCCAAAACCGCGTGCCGTGGGTTCGAGT
CCTACTACCCCTGCCA
Downstream region at tRNA end position 
aagaaacggg
Secondary structure (Cloverleaf model)
>WENV170684409	Trp	CCA
                   c      GCCA aagaaacggg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     C A T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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