The detailed information of tRNA gene sequence


Sequence ID>WENV170684417
Genome IDLFRM01037641
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3172
End posion on genome 3085
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gcttagaggt
tRNA gene sequence 
GCCGGGGTGGCGGAACAGGTAGACGCAGTGGACTCAAAATCCACCGGTACTTGGTACTGT
GCGGGTTCGAGTCCCGCCCCCGGCACCA
Downstream region at tRNA end position 
atgatgaaaa
Secondary structure (Cloverleaf model)
>WENV170684417	Leu	CAA
                   t      ACCA atgatgaaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      C A A        G      | | | | |     G
    A       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGTACTTGGTACTGT
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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