The detailed information of tRNA gene sequence


Sequence ID>WENV170684441
Genome IDLFRM01039410
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 9803
End posion on genome 9727
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gctccatttt
tRNA gene sequence 
GCGCCTGTAGCTCAGCTGGATAGAGCAACGGACTTCTAATCCGTAGGCCAGGGGTTCGAA
TCCCTTCAGGCGCGCCA
Downstream region at tRNA end position 
gagttttatt
Secondary structure (Cloverleaf model)
>WENV170684441	Arg	TCT
                   t      GCCA gagttttatt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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