The detailed information of tRNA gene sequence


Sequence ID>WENV170684465
Genome IDLFRM01040852
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 412
End posion on genome 337
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
caccattatt
tRNA gene sequence 
GCCGACTTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGT
CCTCTAGTCGGCACCA
Downstream region at tRNA end position 
ttttttatgg
Secondary structure (Cloverleaf model)
>WENV170684465	Thr	TGT
                   t      ACCA ttttttatgg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     T - A          T G
                    T     T C T C C     A
      T A A        A      + | + | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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