The detailed information of tRNA gene sequence


Sequence ID>WENV170684471
Genome IDLFRM01041040
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1509
End posion on genome 1437
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
nnnnnnnnat
tRNA gene sequence 
GCCAATGTAGCTCAGCGGTAGAGCACTTCCTTGGTAAGGAAGAGGTCACGGGTTCAATTC
CCGTCATCGGCTCac
Downstream region at tRNA end position 
attaaataaa
Secondary structure (Cloverleaf model)
>WENV170684471	Thr	GGT
                   t      TCac attaaataaa
                     G - C
                     C - G
                     C - G
                     A   C
                     A - T
                     T - A
                     G - C          T T
                    T     T G C C C     A
        G A        A      | | | | |     A
      C     C T C G       A C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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