The detailed information of tRNA gene sequence


Sequence ID>WENV170684476
Genome IDLFRM01041399
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 909
End posion on genome 833
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
attagaagat
tRNA gene sequence 
GGGCTCATAGCTCAGCCGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCGAG
TCCACTTGAGCCCACCA
Downstream region at tRNA end position 
caaaattaaa
Secondary structure (Cloverleaf model)
>WENV170684476	Ile	GAT
                   t      ACCA caaaattaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     T C A C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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