The detailed information of tRNA gene sequence


Sequence ID>WENV170684481
Genome IDLFRM01041874
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2525
End posion on genome 2449
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
attttttgat
tRNA gene sequence 
CGGGACGTGGCGCAGTTTGGTAGCGCGTTTGAATGGGGTTCAAAAGGTCGCAAGTTCGAA
TCTTGTCGTCCCGACCA
Downstream region at tRNA end position 
tttttatttg
Secondary structure (Cloverleaf model)
>WENV170684481	Pro	GGG
                   t      ACCA tttttatttg
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G T T C     A
      T G A        G      + | | | |     G
    T       C G C G       G C A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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