The detailed information of tRNA gene sequence


Sequence ID>WENV170684482
Genome IDLFRM01041874
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 91
End posion on genome 1
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taaaagccgt
tRNA gene sequence 
GGAGGAGTACCCAAGAGGCTGAAGGGGCTGGCTTGGAAAGCTAGTAGGCCGCTAACCCGG
CGCAGGGGTTCAAATCCCCTCTCCTCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170684482	Ser	GGA
                   t      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C C C C     A
      A G A        A      | | | | |     A
    G       A C C C       A G G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGGCCGCTAACCCGGCGC
                    C - G
                    T - A
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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