The detailed information of tRNA gene sequence


Sequence ID>WENV170684510
Genome IDLFRM01043369
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 494
End posion on genome 419
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tgacggggtt
tRNA gene sequence 
GGCCCCGTAGCTCAGGGGATAGAGCACCGCTCTCCTAAAGCGGGTGTCGTTGGTTCGAAT
CCAACCGGGGTCGCCA
Downstream region at tRNA end position 
gttaaaagcc
Secondary structure (Cloverleaf model)
>WENV170684510	Arg	CCT
                   t      GCCA gttaaaagcc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A A C C     A
      G G A        A      | | | | |     G
    G       C T C G       G T T G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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