The detailed information of tRNA gene sequence


Sequence ID>WENV170684544
Genome IDLFRM01045320
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2006
End posion on genome 1929
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
aataagtata
tRNA gene sequence 
GCGTCTGTAGCTCAATTGGATAGAGCGTCGGACTTCGGATCCGAAGGCTTGTGGGTTCGA
ATCCCACCAGACGCGCCA
Downstream region at tRNA end position 
ttcagtccta
Secondary structure (Cloverleaf model)
>WENV170684544	Arg	TCG
                   a      GCCA ttcagtccta
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C A C C C     A
      T A A        A      | | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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