The detailed information of tRNA gene sequence


Sequence ID>WENV170684546
Genome IDLFRM01045455
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1110
End posion on genome 1185
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cttctgatat
tRNA gene sequence 
TCCTCAATAGCTCAGTTGGTAGAGCATGCGGCTGTTAACCGCAGGGTCGTTGGTTCGAGT
CCAACTTGGGGAGCCA
Downstream region at tRNA end position 
taaaaagaga
Secondary structure (Cloverleaf model)
>WENV170684546	Asn	GTT
                   t      GCCA taaaaagaga
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T
                     A - T          T G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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