The detailed information of tRNA gene sequence


Sequence ID>WENV170684568
Genome IDLFRM01046759
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 498
End posion on genome 573
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttgctcggac
tRNA gene sequence 
GGCCCCATCGTCTAGCGGCCTAGGACACTGGCCTCTCACGCCGGTAACAGGGGTTCGAGT
CCCCTTGGGGTCACCA
Downstream region at tRNA end position 
catacacaaa
Secondary structure (Cloverleaf model)
>WENV170684568	Glu	CTC
                   c      ACCA catacacaaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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