The detailed information of tRNA gene sequence


Sequence ID>WENV170684570
Genome IDLFRM01046952
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 357
End posion on genome 430
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ccctcgccga
tRNA gene sequence 
GGGGCTATAGCTCAGTTGGTAGAGCGTCGCGTTCGCAATGCGAAGGTCAGGGGTTCGATT
CCCCTTAGCTCCACgt
Downstream region at tRNA end position 
tgtgatgtcg
Secondary structure (Cloverleaf model)
>WENV170684570	Ala	CGC
                   a      ACgt tgtgatgtcg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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