The detailed information of tRNA gene sequence


Sequence ID>WENV170684590
Genome IDLFRM01047651
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3062
End posion on genome 2988
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ggaacagaac
tRNA gene sequence 
GGGCGGATAGTTCAGCGGTAGAACACCTGCCTTACACGCAGGGGGTCACAGGTTCGAACC
CTGTTTCGCCCACCA
Downstream region at tRNA end position 
ggcttcattg
Secondary structure (Cloverleaf model)
>WENV170684590	Val	TAC
                   c      ACCA ggcttcattg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     A - T          C A
                    T     T G T C C     A
        G A        A      | | | | |     G
      C     C T T G       A C A G G     C
      G     | | | |                 T T
      G     G A A C
        T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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