The detailed information of tRNA gene sequence


Sequence ID>WENV170684591
Genome IDLFRM01047651
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2969
End posion on genome 2893
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tggagaatgc
tRNA gene sequence 
GGGGTCGTAGCTCAGTCGGTTAGAGCGTCGGCCTGTCACGCCGAAGGTCGCGAGTTCGAG
TCTCGTCGGCCCCGCCA
Downstream region at tRNA end position 
ttttaactcc
Secondary structure (Cloverleaf model)
>WENV170684591	Asp	GTC
                   c      GCCA ttttaactcc
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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