The detailed information of tRNA gene sequence


Sequence ID>WENV170684618
Genome IDLFRM01049172
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 232925
End posion on genome 233001
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ttgaaaacat
tRNA gene sequence 
GGGCGATTAGCTCAGCTGGTTAGAGTACCACGTTGACATCGTGGGGGTCGATGGTTCGAG
CCCATTATCGCCCACCA
Downstream region at tRNA end position 
aaaaagcaag
Secondary structure (Cloverleaf model)
>WENV170684618	Val	GAC
                   t      ACCA aaaaagcaag
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C G
                    T     T T A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G A T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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