The detailed information of tRNA gene sequence


Sequence ID>WENV170684624
Genome IDLFRM01049551
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 934
End posion on genome 1022
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttttcagtT
tRNA gene sequence 
GGAGAGGTGCGAGAGTGGCCGAATCGGGCTCCCTGCTAAGGAGTTGACCTGGTAACGGGT
CCGGGGGTTCGAATCCCCCCCTCTCCGGat
Downstream region at tRNA end position 
tttttacaat
Secondary structure (Cloverleaf model)
>WENV170684624	Ser	GCT
                   T      GGat tttttacaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G G G G G     C
    G         | | |                 T T
    C       A T C G
      C G A        G     TGACCTGGTAACGGGTCC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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