The detailed information of tRNA gene sequence


Sequence ID>WENV170684629
Genome IDLFRM01049868
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2397
End posion on genome 2322
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
attcaatcat
tRNA gene sequence 
GCCTCGATAGCTTAGGTGGTAGAGCGCGGGATTCGTAATCCCGAGGTCGCGGGTTCAATC
CCCGCTCGGGGCTCTA
Downstream region at tRNA end position 
tttttttcat
Secondary structure (Cloverleaf model)
>WENV170684629	Thr	CGT
                   t      TCTA tttttttcat
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     A - T          C T
                    T     C G C C C     A
      G G A        A      | | | | |     A
    T       T T C G       G C G G G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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