The detailed information of tRNA gene sequence


Sequence ID>WENV170684674
Genome IDLFRM01051806
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 934
End posion on genome 1021
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caggctaccc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGTGCAGCTCTCGAAAAGCTGTGTGGCGCAAGTCACC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gaaggggctc
Secondary structure (Cloverleaf model)
>WENV170684674	Ser	CGA
                   c      GCCA gaaggggctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | |                   T T
    T       A G G T
      T T A        G     TGTGGCGCAAGTCACC
                    C - G
                    A - T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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