The detailed information of tRNA gene sequence


Sequence ID>WENV170684683
Genome IDLFRM01052449
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 96
End posion on genome 182
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
actcaaacaa
tRNA gene sequence 
GCCCAGATGGCGGAATAGGTAGACGCGCTGGTCTCAAACACCAGTGGATTCACTTCCATG
CCGGTTCGATTCCGGCTCTGGGTACGA
Downstream region at tRNA end position 
aaaagtcccg
Secondary structure (Cloverleaf model)
>WENV170684683	Leu	CAA
                   a      ACGA aaaagtcccg
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    A       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGATTCACTTCCAT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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