The detailed information of tRNA gene sequence


Sequence ID>WENV170684684
Genome IDLFRM01052469
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 640
End posion on genome 565
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cacccgttac
tRNA gene sequence 
TCCTCGATAGCTCAGTCGGTAGAGCAAGTGACTGTTAATCACTGGGTCGCAGGTTCGAGT
CCTGCTCGAGGAGCCA
Downstream region at tRNA end position 
tcagctgctc
Secondary structure (Cloverleaf model)
>WENV170684684	Asn	GTT
                   c      GCCA tcagctgctc
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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