The detailed information of tRNA gene sequence


Sequence ID>WENV170684716
Genome IDLFRM01054941
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 500
End posion on genome 415
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tcgttgccac
tRNA gene sequence 
GGGCGAGTGGCGGAATGGCAGACGCGCTGGCTTCAGGTGCCAGTGTCCTTCGGGACGTGG
GGGTTCAAGTCCCCCTTCGCCCACCA
Downstream region at tRNA end position 
cgggaaaacc
Secondary structure (Cloverleaf model)
>WENV170684716	Leu	CAG
                   c      ACCA cgggaaaacc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G + T          T G
                    T     C C C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G G G G G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TGTCCTTCGGGACGT
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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