The detailed information of tRNA gene sequence


Sequence ID>WENV170684749
Genome IDLFRM01056583
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 287
End posion on genome 215
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ttccatatga
tRNA gene sequence 
AGGTCTGTAGTGTAGAGGATATCACTGGAGCCTCCGGAGCTCCGAACCTGGGTTCGATTC
CCAGCAGACCTGCtt
Downstream region at tRNA end position 
acttttaaca
Secondary structure (Cloverleaf model)
>WENV170684749	Arg	CCG
                   a      GCtt acttttaaca
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T T
                    T     G A C C C     A
      A G A        A      | | | | |     G
    G       T G T G       C T G G G     C
    G         | | |                 T T
    A       T C A C
      T A          T     GAAC
                    G - C
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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