The detailed information of tRNA gene sequence


Sequence ID>WENV170684764
Genome IDLFRM01057583
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 216
End posion on genome 141
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
caagggatgt
tRNA gene sequence 
GGGACGTTAGCTCAGTTGGTAGAGCAGCGGACTTTTAATCCGTTGGTCGCAGGTTCGAAT
CCTGCACGTCCTACCA
Downstream region at tRNA end position 
agccacacaa
Secondary structure (Cloverleaf model)
>WENV170684764	Lys	TTT
                   t      ACCA agccacacaa
                     G + T
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     T - A          T A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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