The detailed information of tRNA gene sequence


Sequence ID>WENV170684768
Genome IDLFRM01057628
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1717
End posion on genome 1802
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
gctctggagt
tRNA gene sequence 
GCCGAAGTGGTGGAATTGGTAGACACGCTATCTTGAGGGGGTAGTGGCCCACGGTCGTGC
GAGTTCGAGTCTCGCCTTCGGCACCA
Downstream region at tRNA end position 
gctcnnnnnn
Secondary structure (Cloverleaf model)
>WENV170684768	Leu	GAG
                   t      ACCA gctcnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C G C T C     A
      T A A        G      | | | | |     G
    T       G G T G       G C G A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGGCCCACGGTCGT
                    C - G
                    T - A
                    A - T
                    T + G
                    C - G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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