The detailed information of tRNA gene sequence


Sequence ID>WENV170684796
Genome IDLFRM01059246
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 21834
End posion on genome 21908
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
acccatgagg
tRNA gene sequence 
GGACCCATGGGGTAGAGGAGATCCTTTTGGGCTTCGAACCCAAGGACGCGGGTTCAATTC
CCGCTGGGTCCGTCA
Downstream region at tRNA end position 
gttcttctgg
Secondary structure (Cloverleaf model)
>WENV170684796	Arg	TCG
                   g      GTCA gttcttctgg
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     C G C C C     A
      A G A        G      | | | | |     A
    G       T G G G       G C G G G     C
    G         | | +                 T T
    A       T C C T
      G A          T     GGAC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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