The detailed information of tRNA gene sequence


Sequence ID>WENV170684841
Genome IDLFRM01060814
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 20273
End posion on genome 20349
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ctgccatttg
tRNA gene sequence 
GGGCCCGTAGCTTAGCCTGGCGGAGCGCACGGCTGATAACCGTGAGGTCCTGCGTTCGAA
TCGCAGCGGGCCCACCA
Downstream region at tRNA end position 
aattcaatat
Secondary structure (Cloverleaf model)
>WENV170684841	Ile	GAT
                   g      ACCA aattcaatat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C G C     A
      C G A        A      | | | | |     G
    C       T T C G       C T G C G     C
    T       + | | |                 T T
    G       G A G C
      G C G        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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