The detailed information of tRNA gene sequence


Sequence ID>WENV170684857
Genome IDLFRM01061468
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5572
End posion on genome 5648
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
atcagcatgt
tRNA gene sequence 
GGGCTCGTAGCTCAGCTGGATAGAGTGCTTGACTACGAATCAAGAGGTCGTGGGTTCGAA
TCCCGCCGGGCTCACCA
Downstream region at tRNA end position 
tagagcaaca
Secondary structure (Cloverleaf model)
>WENV170684857	Arg	ACG
                   t      ACCA tagagcaaca
                     G - C
                     G + T
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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