The detailed information of tRNA gene sequence


Sequence ID>WENV170684902
Genome IDLFRM01063812
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1043
End posion on genome 967
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ccccggaagc
tRNA gene sequence 
GGGCGTGTAGCTCAGTCGGTTAGAGCGCGTCCCTGATAAGGACGAGGTCCCTGGTTCGAT
TCCAGGCACGCCCACCA
Downstream region at tRNA end position 
ctcagcggaa
Secondary structure (Cloverleaf model)
>WENV170684902	Ile	GAT
                   c      ACCA ctcagcggaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T T
                    T     G G A C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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