The detailed information of tRNA gene sequence


Sequence ID>WENV170685078
Genome IDLFRM01071920
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 411
End posion on genome 337
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
cttgagctgc
tRNA gene sequence 
GGGGATGTCGTATAGTGGCTAATACCTCAGCCTTCCAAGCTGAAGACGCGGGTTCGATTC
CCGTCATCCCCTCCA
Downstream region at tRNA end position 
cgtgttgcga
Secondary structure (Cloverleaf model)
>WENV170685078	Gly	TCC
                   c      TCCA cgtgttgcga
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T G C C C     A
      T G A        C      + | | | |     G
    G       T A T G       G C G G G     C
    G       | | | |                 T T
    C       A T A C
      T A          C     AGAC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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