The detailed information of tRNA gene sequence


Sequence ID>WENV170685099
Genome IDLFRM01072973
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3699
End posion on genome 3624
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgacagccT
tRNA gene sequence 
GGACCTTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGCAGGTTCGAG
TCCTGCAAGGTCCATat
Downstream region at tRNA end position 
tatggttatg
Secondary structure (Cloverleaf model)
>WENV170685099	Met	CAT
                   T      ATat tatggttatg
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G - C
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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