The detailed information of tRNA gene sequence


Sequence ID>WENV170685134
Genome IDLFRM01074085
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 9345
End posion on genome 9420
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttaaatgt
tRNA gene sequence 
CGCGGGATGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGAAGGTTCAAAT
CCTTCTCCCGCAACCA
Downstream region at tRNA end position 
aactagtttg
Secondary structure (Cloverleaf model)
>WENV170685134	Met	CAT
                   t      ACCA aactagtttg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T T C C     A
      T G A        G      | | | | |     A
    T       C G A G       G A A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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