The detailed information of tRNA gene sequence


Sequence ID>WENV170685151
Genome IDLFRM01075334
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 23548
End posion on genome 23474
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaacaacagt
tRNA gene sequence 
GGGCGACTAGCTCAGCGGGAGAGCGCTTCCCTCACACGGAAGAGGTCGCAGGTTCGAAAC
CTGCGTCGCCCACCA
Downstream region at tRNA end position 
ttttaatttc
Secondary structure (Cloverleaf model)
>WENV170685151	Val	CAC
                   t      ACCA ttttaatttc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G          A A
                    T     C G T C C     A
        G A        A      | | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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