The detailed information of tRNA gene sequence


Sequence ID>WENV170685157
Genome IDLFRM01075883
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2636
End posion on genome 2712
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gttgtgatgt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGAAGGTTCGAA
TCCTTTCGCCCCGACCA
Downstream region at tRNA end position 
acacattcaa
Secondary structure (Cloverleaf model)
>WENV170685157	Pro	TGG
                   t      ACCA acacattcaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T T T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G A A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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