The detailed information of tRNA gene sequence


Sequence ID>WENV170685158
Genome IDLFRM01075977
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1345
End posion on genome 1269
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gatgctgtat
tRNA gene sequence 
CGGGGTGTAGCGCAGTTTGGTAGCGCACCTGGTTTGGGACCAGGGGGCCGCGGGTTCAAA
TCCTGCCACCCCGACCA
Downstream region at tRNA end position 
ttttaacatg
Secondary structure (Cloverleaf model)
>WENV170685158	Pro	TGG
                   t      ACCA ttttaacatg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | + | |     A
    T       C G C G       G C G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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