The detailed information of tRNA gene sequence


Sequence ID>WENV170685178
Genome IDLFRM01076954
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 15785
End posion on genome 15870
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtagaagcag
tRNA gene sequence 
GCCGGGATAGTCTAGTCTGGTAAGGCGGTGGCCTTGAAAGCCACTGGTGCCTGGCACCTC
GGGAGTTCAAATCTCCCTCCCGGCGCtt
Downstream region at tRNA end position 
tgatatatcc
Secondary structure (Cloverleaf model)
>WENV170685178	Ser	TGA
                   g      GCtt tgatatatcc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    T       | | + |                 T T
    G       A G G C
      G T A        G     TGGTGCCTGGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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