The detailed information of tRNA gene sequence


Sequence ID>WENV170685208
Genome IDLFRM01078413
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2083
End posion on genome 2168
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaattctat
tRNA gene sequence 
GTTGAGGTAGCCAAGCCTGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCTCTGGGACTC
GAGGGTTCAAATCCCTCCCTCAACGCtt
Downstream region at tRNA end position 
tcaccgacaa
Secondary structure (Cloverleaf model)
>WENV170685208	Ser	GCT
                   t      GCtt tcaccgacaa
                     G - C
                     T - A
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       A C C G       G A G G G     C
    T       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCCTCTGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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