The detailed information of tRNA gene sequence


Sequence ID>WENV170685221
Genome IDLFRM01079115
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2606
End posion on genome 2532
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tcatctcgtt
tRNA gene sequence 
GGGCGATTAGTTCAGAGGTAGAACGCTTCCTTGACACGGAAGAGGTCAGAAGTTCAATTC
TTCTATCGCCCACCA
Downstream region at tRNA end position 
tagtcgtaaa
Secondary structure (Cloverleaf model)
>WENV170685221	Val	GAC
                   t      ACCA tagtcgtaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T T
                    T     T C T T C     A
        G A        A      | | | | |     A
      A     C T T G       A G A A G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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