The detailed information of tRNA gene sequence


Sequence ID>WENV170685233
Genome IDLFRM01079843
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 343
End posion on genome 267
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataggtgcct
tRNA gene sequence 
GGACCCTTAGCTCAGTTGGTTAGAGCTACCGGCTCATAACCGGTTGGTCGTAGGTTCGAG
TCCTACAGGGTCCACCA
Downstream region at tRNA end position 
agttggagga
Secondary structure (Cloverleaf model)
>WENV170685233	Met	CAT
                   t      ACCA agttggagga
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     TGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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