The detailed information of tRNA gene sequence


Sequence ID>WENV170685248
Genome IDLFRM01080452
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 433
End posion on genome 358
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
taagtctaat
tRNA gene sequence 
GGGGGCATAGCTCAGCTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGCGGTTCGATC
CCGCTTGTCTCCACCA
Downstream region at tRNA end position 
aatttaataa
Secondary structure (Cloverleaf model)
>WENV170685248	Ala	GGC
                   t      ACCA aatttaataa
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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