The detailed information of tRNA gene sequence


Sequence ID>WENV170685250
Genome IDLFRM01080531
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 10980
End posion on genome 10907
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
aacctatctt
tRNA gene sequence 
GCGGGTGTAGCTCAGTGGCAGAGCCCTGGCTTCCCAAGCCAGTCGCGAGGGTTCGATTCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
tttttcagga
Secondary structure (Cloverleaf model)
>WENV170685250	Gly	CCC
                   t      TCCA tttttcagga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
        G A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        C     TCGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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