The detailed information of tRNA gene sequence


Sequence ID>WENV170685326
Genome IDLFRM01084664
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 21
End posion on genome 105
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gatcctttga
tRNA gene sequence 
GCGAGGGTAGCTAAGCCTGGCCAAAGGCGCCGGACTTAAGATCCGGTCCCGAAGGGGTCC
GTGGGTTCGAATCCCACCCCTCGCAtcg
Downstream region at tRNA end position 
ctgttttggg
Secondary structure (Cloverleaf model)
>WENV170685326	Leu	TAA
                   a      Atcg ctgttttggg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     G
  T         A T C G       G T G G G     C
  G           + | |                 T T
  G         A G G C
    C C A A        G     TCCCGAAGGGGTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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