The detailed information of tRNA gene sequence


Sequence ID>WENV170685408
Genome IDLFRM01089817
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 160
End posion on genome 84
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccttttcga
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTCGGTCCGGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
ttttcgcctc
Secondary structure (Cloverleaf model)
>WENV170685408	Met	CAT
                   a      ACCA ttttcgcctc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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