The detailed information of tRNA gene sequence


Sequence ID>WENV170685440
Genome IDLFRM01091247
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1445
End posion on genome 1370
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtaatattat
tRNA gene sequence 
GGTCCAGTAGTGTAGCGGTTAACATGCCTGCCTGTCACGCAGGAGATCGCGGGTTCGATT
CCCGTCTGGACCGCCA
Downstream region at tRNA end position 
aataaaaact
Secondary structure (Cloverleaf model)
>WENV170685440	Asp	GTC
                   t      GCCA aataaaaact
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     T G C C C     A
      C G A        A      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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