The detailed information of tRNA gene sequence


Sequence ID>WENV170685476
Genome IDLFRM01094101
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 709
End posion on genome 800
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgagctttT
tRNA gene sequence 
GGAGAAGTACCCAAGCTGGCCGAAGGGGCTCCCCTGGAAAGGGAGTAGGTCGTTAATAGC
GGCGCCAGGGTTCAAATCCCTGCTTCTCCGTga
Downstream region at tRNA end position 
caacggaaaa
Secondary structure (Cloverleaf model)
>WENV170685476	Ser	GGA
                   T      GTga caacggaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     G T C C C     A
    T C G A        A      | | | | |     A
  G         A C C C       C A G G G     C
  G           | | |                 T T
  C         A G G G
    C G A          G     TAGGTCGTTAATAGCGGCGC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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