The detailed information of tRNA gene sequence


Sequence ID>WENV170685478
Genome IDLFRM01094174
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 9442
End posion on genome 9517
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
actataggta
tRNA gene sequence 
GATTCGCTAGCTCAGTCGGTAGAGCACATCCCTTTTAAGGATGGGGTCCTGGGTTCGAGC
CCCAGGCGGATCACTA
Downstream region at tRNA end position 
aaaacgtgag
Secondary structure (Cloverleaf model)
>WENV170685478	Lys	TTT
                   a      ACTA aaaacgtgag
                     G - C
                     A - T
                     T - A
                     T + G
                     C - G
                     G - C
                     C - G          C G
                    T     G A C C C     A
      T G A        A      | | | | |     G
    C       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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