The detailed information of tRNA gene sequence


Sequence ID>WENV170685479
Genome IDLFRM01094174
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 9674
End posion on genome 9749
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
attacagtta
tRNA gene sequence 
GATTCGCTAGCTCAGTCGGTAGAGCACATCCCTTTTAAGGATGGGGTCCTGGGTTCGAGC
CCCAGGCGGATCACCA
Downstream region at tRNA end position 
tgaaggccaa
Secondary structure (Cloverleaf model)
>WENV170685479	Lys	TTT
                   a      ACCA tgaaggccaa
                     G - C
                     A - T
                     T - A
                     T + G
                     C - G
                     G - C
                     C - G          C G
                    T     G A C C C     A
      T G A        A      | | | | |     G
    C       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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