The detailed information of tRNA gene sequence


Sequence ID>WENV170685486
Genome IDLFRM01094728
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 10950
End posion on genome 11022
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gaattccagc
tRNA gene sequence 
GCCAAGGTGGCGGAGTGGCTACGCGGTTGACTGCAGATCAACTACACCCCGGTTCAAATC
CGGGCCCTGGCTCtc
Downstream region at tRNA end position 
ttctgttgta
Secondary structure (Cloverleaf model)
>WENV170685486	Cys	GCA
                   c      TCtc ttctgttgta
                     G - C
                     C - G
                     C - G
                     A - T
                     A   C
                     G - C
                     G - C          T A
                    T     G G G C C     A
        G A        G      | | | | |     A
      T     G G C G       C C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        G     TACAC
                    G - C
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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